Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 BC037039-201ENSMUST00000192003 2205 ntBASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Mir8117-201ENSMUST00000184773 107 ntBASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Gm44492-201ENSMUST00000197012 141 ntBASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vps54Q5SPW0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps54Q5SPW0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps54Q5SPW0 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms