Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Gm27306-201ENSMUST00000183970 107 ntBASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Gm31326-201ENSMUST00000191856 1048 ntBASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
Trim41Q5NCC3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim41Q5NCC3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Gm44855-201ENSMUST00000205725 362 ntBASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Trim41Q5NCC3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Gm37166-201ENSMUST00000195473 2474 ntBASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Gm8602-201ENSMUST00000184045 607 ntBASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Gm18827-201ENSMUST00000188341 790 ntBASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Hivep3-201ENSMUST00000084306 2973 ntBASIC26.37■■□□□ 1.81
Trim41Q5NCC3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Gm13829-201ENSMUST00000119600 138 ntBASIC26.36■■□□□ 1.81
Trim41Q5NCC3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Trim41Q5NCC3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Gm12017-201ENSMUST00000122453 1003 ntBASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim41Q5NCC3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm22065-201ENSMUST00000103753 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm22066-201ENSMUST00000103761 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24932-201ENSMUST00000103763 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24115-201ENSMUST00000103799 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm22190-201ENSMUST00000103827 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm22191-201ENSMUST00000103831 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24721-201ENSMUST00000103849 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm28018-201ENSMUST00000103869 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm26399-201ENSMUST00000103937 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm25349-201ENSMUST00000177728 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm23616-201ENSMUST00000177797 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm25871-201ENSMUST00000177816 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24752-201ENSMUST00000178240 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24496-201ENSMUST00000178287 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm25649-201ENSMUST00000178476 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm25548-201ENSMUST00000178681 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm23147-201ENSMUST00000178841 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm26095-201ENSMUST00000179270 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm22171-201ENSMUST00000179283 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm23936-201ENSMUST00000179354 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm22619-201ENSMUST00000179516 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm25255-201ENSMUST00000179579 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24755-201ENSMUST00000179691 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm26506-201ENSMUST00000179692 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm25086-201ENSMUST00000179931 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm23243-201ENSMUST00000180047 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24659-201ENSMUST00000180212 110 ntBASIC26.34■■□□□ 1.81
Trim41Q5NCC3 Gm24169-201ENSMUST00000180244 110 ntBASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms