Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn2bQ56A07 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.12■□□□□ 0.01
Scn2bQ56A07 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Gm17971-201ENSMUST00000190239 806 ntBASIC15.12■□□□□ 0.01
Scn2bQ56A07 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.12■□□□□ 0.01
Scn2bQ56A07 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scn2bQ56A07 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.11■□□□□ 0.01
Scn2bQ56A07 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.11■□□□□ 0.01
Scn2bQ56A07 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scn2bQ56A07 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Gm7153-201ENSMUST00000117092 455 ntBASIC15.1■□□□□ 0.01
Scn2bQ56A07 Gm12644-201ENSMUST00000119935 606 ntBASIC15.1■□□□□ 0.01
Scn2bQ56A07 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Gm27867-201ENSMUST00000184778 125 ntBASIC15.1■□□□□ 0.01
Scn2bQ56A07 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Scn2bQ56A07 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scn2bQ56A07 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms