Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp48Q3V0C5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp48Q3V0C5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp48Q3V0C5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.89■□□□□ 0.62
Usp48Q3V0C5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp48Q3V0C5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Gm15358-201ENSMUST00000119249 520 ntBASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Gm8344-201ENSMUST00000119813 856 ntBASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Gm5177-201ENSMUST00000183092 997 ntBASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp48Q3V0C5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp48Q3V0C5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp48Q3V0C5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Gm18889-201ENSMUST00000174284 929 ntBASIC18.86■□□□□ 0.61
Usp48Q3V0C5 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp48Q3V0C5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms