Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3b2Q3UJB0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3b2Q3UJB0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Mir1897-201ENSMUST00000122581 272 ntBASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 AY702102-202ENSMUST00000194651 1173 ntBASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3b2Q3UJB0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3b2Q3UJB0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Gm22189-201ENSMUST00000103822 86 ntBASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Gm46209-201ENSMUST00000217912 553 ntBASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3b2Q3UJB0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3b2Q3UJB0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b2Q3UJB0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3b2Q3UJB0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms