Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Spg11Q3UHA3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.96□□□□□ -0.17
Spg11Q3UHA3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Spg11Q3UHA3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Spg11Q3UHA3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Spg11Q3UHA3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm29199-201ENSMUST00000187766 775 ntBASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm2495-201ENSMUST00000191160 466 ntBASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm27572-201ENSMUST00000183702 255 ntBASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Spg11Q3UHA3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Gm3961-201ENSMUST00000204425 994 ntBASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Spg11Q3UHA3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Spg11Q3UHA3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms