Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.82□□□□□ -0.52
Cdx4Q07424 Gm7862-201ENSMUST00000121461 292 ntBASIC11.82□□□□□ -0.52
Cdx4Q07424 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdx4Q07424 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Cdx4Q07424 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdx4Q07424 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.82□□□□□ -0.52
Cdx4Q07424 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.82□□□□□ -0.52
Cdx4Q07424 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.82□□□□□ -0.52
Cdx4Q07424 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Cdx4Q07424 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdx4Q07424 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Gm12497-201ENSMUST00000138778 237 ntBASIC11.81□□□□□ -0.52
Cdx4Q07424 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.81□□□□□ -0.52
Cdx4Q07424 Gm18206-201ENSMUST00000207027 926 ntBASIC11.81□□□□□ -0.52
Cdx4Q07424 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.81□□□□□ -0.52
Cdx4Q07424 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx4Q07424 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdx4Q07424 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.81□□□□□ -0.52
Cdx4Q07424 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.8□□□□□ -0.52
Cdx4Q07424 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdx4Q07424 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Cdx4Q07424 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Gm10060-201ENSMUST00000212002 111 ntBASIC11.8□□□□□ -0.52
Cdx4Q07424 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Gm6296-201ENSMUST00000222599 943 ntBASIC11.8□□□□□ -0.52
Cdx4Q07424 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdx4Q07424 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx4Q07424 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms