Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm43703-201ENSMUST00000200523 763 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hspg2Q05793 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Hspg2Q05793 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.12□□□□□ -0.63
Hspg2Q05793 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Hspg2Q05793 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.11□□□□□ -0.63
Hspg2Q05793 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hspg2Q05793 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.11□□□□□ -0.63
Hspg2Q05793 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.1□□□□□ -0.63
Hspg2Q05793 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.1□□□□□ -0.63
Hspg2Q05793 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hspg2Q05793 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hspg2Q05793 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hspg2Q05793 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hspg2Q05793 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hspg2Q05793 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hspg2Q05793 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hspg2Q05793 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.09□□□□□ -0.63
Hspg2Q05793 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Hspg2Q05793 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms