Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.63□□□□□ -0.23
SgcbP82349 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SgcbP82349 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SgcbP82349 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.62□□□□□ -0.23
SgcbP82349 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.62□□□□□ -0.23
SgcbP82349 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Psmb5-202ENSMUST00000227257 622 ntBASIC13.62□□□□□ -0.23
SgcbP82349 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SgcbP82349 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Gm15823-201ENSMUST00000064305 670 ntBASIC13.62□□□□□ -0.23
SgcbP82349 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SgcbP82349 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.62□□□□□ -0.23
SgcbP82349 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SgcbP82349 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.62□□□□□ -0.23
SgcbP82349 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SgcbP82349 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.61□□□□□ -0.23
SgcbP82349 Gm8318-201ENSMUST00000182954 872 ntBASIC13.61□□□□□ -0.23
SgcbP82349 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.61□□□□□ -0.23
SgcbP82349 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.61□□□□□ -0.23
SgcbP82349 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.61□□□□□ -0.23
SgcbP82349 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.61□□□□□ -0.23
SgcbP82349 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SgcbP82349 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 App-207ENSMUST00000227737 2827 ntBASIC13.61□□□□□ -0.23
SgcbP82349 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SgcbP82349 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SgcbP82349 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SgcbP82349 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SgcbP82349 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SgcbP82349 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Gm14140-201ENSMUST00000119999 995 ntBASIC13.6□□□□□ -0.23
SgcbP82349 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.6□□□□□ -0.23
SgcbP82349 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.6□□□□□ -0.23
SgcbP82349 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.6□□□□□ -0.23
SgcbP82349 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.6□□□□□ -0.23
SgcbP82349 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SgcbP82349 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms