Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Msx3P70354 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Msx3P70354 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Msx3P70354 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Msx3P70354 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Msx3P70354 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.71■□□□□ 0.11
Msx3P70354 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Msx3P70354 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Msx3P70354 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.71■□□□□ 0.1
Msx3P70354 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Msx3P70354 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Msx3P70354 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msx3P70354 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Msx3P70354 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Msx3P70354 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Msx3P70354 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.7■□□□□ 0.1
Msx3P70354 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.7■□□□□ 0.1
Msx3P70354 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Msx3P70354 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.7■□□□□ 0.1
Msx3P70354 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Msx3P70354 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Msx3P70354 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Msx3P70354 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Msx3P70354 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Msx3P70354 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Msx3P70354 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.69■□□□□ 0.1
Msx3P70354 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.69■□□□□ 0.1
Msx3P70354 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.69■□□□□ 0.1
Msx3P70354 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.69■□□□□ 0.1
Msx3P70354 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.69■□□□□ 0.1
Msx3P70354 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Msx3P70354 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.69■□□□□ 0.1
Msx3P70354 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Msx3P70354 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.68■□□□□ 0.1
Msx3P70354 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.68■□□□□ 0.1
Msx3P70354 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.68■□□□□ 0.1
Msx3P70354 Gm13418-201ENSMUST00000119097 944 ntBASIC15.68■□□□□ 0.1
Msx3P70354 Gm9103-201ENSMUST00000119371 405 ntBASIC15.68■□□□□ 0.1
Msx3P70354 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.68■□□□□ 0.1
Msx3P70354 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.68■□□□□ 0.1
Msx3P70354 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.68■□□□□ 0.1
Msx3P70354 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Msx3P70354 Gm44357-201ENSMUST00000195897 142 ntBASIC15.68■□□□□ 0.1
Msx3P70354 Gm19658-201ENSMUST00000196231 138 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms