Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Abcd3P55096 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Gm27459-201ENSMUST00000184860 107 ntBASIC13.68□□□□□ -0.22
Abcd3P55096 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.68□□□□□ -0.22
Abcd3P55096 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.68□□□□□ -0.22
Abcd3P55096 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.68□□□□□ -0.22
Abcd3P55096 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Abcd3P55096 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Abcd3P55096 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.67□□□□□ -0.22
Abcd3P55096 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.67□□□□□ -0.22
Abcd3P55096 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.67□□□□□ -0.22
Abcd3P55096 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.67□□□□□ -0.22
Abcd3P55096 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Abcd3P55096 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Abcd3P55096 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Abcd3P55096 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Abcd3P55096 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.66□□□□□ -0.22
Abcd3P55096 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd3P55096 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Abcd3P55096 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Gm25990-201ENSMUST00000102440 86 ntBASIC13.66□□□□□ -0.22
Abcd3P55096 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.66□□□□□ -0.22
Abcd3P55096 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.66□□□□□ -0.22
Abcd3P55096 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd3P55096 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd3P55096 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.66□□□□□ -0.22
Abcd3P55096 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd3P55096 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.66□□□□□ -0.22
Abcd3P55096 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Abcd3P55096 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Abcd3P55096 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.65□□□□□ -0.22
Abcd3P55096 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Abcd3P55096 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd3P55096 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd3P55096 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd3P55096 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Abcd3P55096 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms