Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Nub1P54729 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.43■□□□□ 0.22
Nub1P54729 Gm8318-201ENSMUST00000182954 872 ntBASIC16.43■□□□□ 0.22
Nub1P54729 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.43■□□□□ 0.22
Nub1P54729 Gm37153-201ENSMUST00000193637 231 ntBASIC16.43■□□□□ 0.22
Nub1P54729 Gm2651-201ENSMUST00000203560 838 ntBASIC16.43■□□□□ 0.22
Nub1P54729 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.43■□□□□ 0.22
Nub1P54729 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.43■□□□□ 0.22
Nub1P54729 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nub1P54729 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.43■□□□□ 0.22
Nub1P54729 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nub1P54729 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nub1P54729 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.42■□□□□ 0.22
Nub1P54729 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Nub1P54729 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Gm12350-201ENSMUST00000121208 462 ntBASIC16.42■□□□□ 0.22
Nub1P54729 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.42■□□□□ 0.22
Nub1P54729 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Nub1P54729 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Mir5126-201ENSMUST00000175513 77 ntBASIC16.42■□□□□ 0.22
Nub1P54729 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.42■□□□□ 0.22
Nub1P54729 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.42■□□□□ 0.22
Nub1P54729 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nub1P54729 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Nub1P54729 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nub1P54729 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nub1P54729 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Nub1P54729 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nub1P54729 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nub1P54729 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.41■□□□□ 0.22
Nub1P54729 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.41■□□□□ 0.22
Nub1P54729 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.41■□□□□ 0.22
Nub1P54729 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Nub1P54729 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.41■□□□□ 0.22
Nub1P54729 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Gm15590-201ENSMUST00000078419 552 ntBASIC16.41■□□□□ 0.22
Nub1P54729 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nub1P54729 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nub1P54729 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nub1P54729 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms