Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.26■□□□□ 0.67
Msh6P54276 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.26■□□□□ 0.67
Msh6P54276 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Msh6P54276 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.26■□□□□ 0.67
Msh6P54276 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh6P54276 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Msh6P54276 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Msh6P54276 Gm6415-201ENSMUST00000118488 348 ntBASIC19.25■□□□□ 0.67
Msh6P54276 Gm11424-201ENSMUST00000121929 829 ntBASIC19.25■□□□□ 0.67
Msh6P54276 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Msh6P54276 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Gm38294-201ENSMUST00000192831 381 ntBASIC19.25■□□□□ 0.67
Msh6P54276 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.25■□□□□ 0.67
Msh6P54276 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.25■□□□□ 0.67
Msh6P54276 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Msh6P54276 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh6P54276 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Msh6P54276 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Msh6P54276 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Msh6P54276 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.24■□□□□ 0.67
Msh6P54276 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Msh6P54276 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Msh6P54276 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh6P54276 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.23■□□□□ 0.67
Msh6P54276 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Msh6P54276 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Msh6P54276 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.23■□□□□ 0.67
Msh6P54276 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Msh6P54276 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msh6P54276 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC19.23■□□□□ 0.67
Msh6P54276 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.22■□□□□ 0.67
Msh6P54276 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.22■□□□□ 0.67
Msh6P54276 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC19.22■□□□□ 0.67
Msh6P54276 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.22■□□□□ 0.67
Msh6P54276 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.22■□□□□ 0.67
Msh6P54276 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Msh6P54276 Gm18737-201ENSMUST00000173594 937 ntBASIC19.22■□□□□ 0.67
Msh6P54276 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.22■□□□□ 0.67
Msh6P54276 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Msh6P54276 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC19.22■□□□□ 0.67
Msh6P54276 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Msh6P54276 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Msh6P54276 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh6P54276 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms