Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Atoh1P48985 Gm24694-201ENSMUST00000180054 110 ntBASIC17.19■□□□□ 0.34
Atoh1P48985 Gm27663-201ENSMUST00000184839 110 ntBASIC17.19■□□□□ 0.34
Atoh1P48985 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.19■□□□□ 0.34
Atoh1P48985 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.19■□□□□ 0.34
Atoh1P48985 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atoh1P48985 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Atoh1P48985 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atoh1P48985 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.19■□□□□ 0.34
Atoh1P48985 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.18■□□□□ 0.34
Atoh1P48985 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.18■□□□□ 0.34
Atoh1P48985 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.18■□□□□ 0.34
Atoh1P48985 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Atoh1P48985 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atoh1P48985 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.18■□□□□ 0.34
Atoh1P48985 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atoh1P48985 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.17■□□□□ 0.34
Atoh1P48985 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Gm24543-201ENSMUST00000103867 82 ntBASIC17.17■□□□□ 0.34
Atoh1P48985 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.17■□□□□ 0.34
Atoh1P48985 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.17■□□□□ 0.34
Atoh1P48985 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.17■□□□□ 0.34
Atoh1P48985 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.17■□□□□ 0.34
Atoh1P48985 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.17■□□□□ 0.34
Atoh1P48985 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atoh1P48985 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Atoh1P48985 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
Atoh1P48985 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.16■□□□□ 0.34
Atoh1P48985 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.16■□□□□ 0.34
Atoh1P48985 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC17.16■□□□□ 0.34
Atoh1P48985 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.16■□□□□ 0.34
Atoh1P48985 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.16■□□□□ 0.34
Atoh1P48985 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Atoh1P48985 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Atoh1P48985 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atoh1P48985 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atoh1P48985 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atoh1P48985 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atoh1P48985 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Atoh1P48985 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Atoh1P48985 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.15■□□□□ 0.34
Atoh1P48985 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atoh1P48985 Gm29667-201ENSMUST00000190817 490 ntBASIC17.15■□□□□ 0.34
Atoh1P48985 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Atoh1P48985 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.15■□□□□ 0.34
Atoh1P48985 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atoh1P48985 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Atoh1P48985 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atoh1P48985 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Atoh1P48985 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Atoh1P48985 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Atoh1P48985 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Atoh1P48985 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Atoh1P48985 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.14■□□□□ 0.33
Atoh1P48985 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Atoh1P48985 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms