Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GdnfP48540 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
GdnfP48540 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
GdnfP48540 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
GdnfP48540 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GdnfP48540 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Olfr129-201ENSMUST00000122318 993 ntBASIC13.42□□□□□ -0.26
GdnfP48540 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.42□□□□□ -0.26
GdnfP48540 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
GdnfP48540 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GdnfP48540 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
GdnfP48540 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GdnfP48540 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GdnfP48540 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
GdnfP48540 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Gm27704-201ENSMUST00000185094 107 ntBASIC13.41□□□□□ -0.26
GdnfP48540 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.41□□□□□ -0.26
GdnfP48540 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.41□□□□□ -0.26
GdnfP48540 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
GdnfP48540 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
GdnfP48540 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.41□□□□□ -0.26
GdnfP48540 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GdnfP48540 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
GdnfP48540 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GdnfP48540 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.4□□□□□ -0.26
GdnfP48540 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
GdnfP48540 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.4□□□□□ -0.26
GdnfP48540 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GdnfP48540 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.4□□□□□ -0.26
GdnfP48540 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.4□□□□□ -0.26
GdnfP48540 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GdnfP48540 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.4□□□□□ -0.26
GdnfP48540 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GdnfP48540 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
GdnfP48540 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
GdnfP48540 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GdnfP48540 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.39□□□□□ -0.27
GdnfP48540 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.39□□□□□ -0.27
GdnfP48540 Gm27742-201ENSMUST00000184667 60 ntBASIC13.39□□□□□ -0.27
GdnfP48540 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GdnfP48540 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.39□□□□□ -0.27
GdnfP48540 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GdnfP48540 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GdnfP48540 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.39□□□□□ -0.27
GdnfP48540 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms