Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Gm11950-201ENSMUST00000121615 838 ntBASIC12.63□□□□□ -0.39
Hist1h1aP43275 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.63□□□□□ -0.39
Hist1h1aP43275 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.62□□□□□ -0.39
Hist1h1aP43275 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.62□□□□□ -0.39
Hist1h1aP43275 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.62□□□□□ -0.39
Hist1h1aP43275 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.62□□□□□ -0.39
Hist1h1aP43275 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hist1h1aP43275 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Hist1h1aP43275 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.61□□□□□ -0.39
Hist1h1aP43275 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.61□□□□□ -0.39
Hist1h1aP43275 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Gm10231-201ENSMUST00000181584 441 ntBASIC12.61□□□□□ -0.39
Hist1h1aP43275 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Gm10175-202ENSMUST00000208752 441 ntBASIC12.61□□□□□ -0.39
Hist1h1aP43275 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hist1h1aP43275 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms