Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
LdlrP35951 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LdlrP35951 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.2■□□□□ 0.02
LdlrP35951 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.2■□□□□ 0.02
LdlrP35951 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LdlrP35951 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.2■□□□□ 0.02
LdlrP35951 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LdlrP35951 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LdlrP35951 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.19■□□□□ 0.02
LdlrP35951 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LdlrP35951 Gm25406-201ENSMUST00000157599 105 ntBASIC15.19■□□□□ 0.02
LdlrP35951 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.19■□□□□ 0.02
LdlrP35951 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.19■□□□□ 0.02
LdlrP35951 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.19■□□□□ 0.02
LdlrP35951 Rps4l-201ENSMUST00000071745 943 ntBASIC15.19■□□□□ 0.02
LdlrP35951 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LdlrP35951 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LdlrP35951 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LdlrP35951 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.18■□□□□ 0.02
LdlrP35951 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.18■□□□□ 0.02
LdlrP35951 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.18■□□□□ 0.02
LdlrP35951 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LdlrP35951 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
LdlrP35951 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LdlrP35951 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LdlrP35951 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LdlrP35951 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.17■□□□□ 0.02
LdlrP35951 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.17■□□□□ 0.02
LdlrP35951 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.17■□□□□ 0.02
LdlrP35951 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LdlrP35951 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.17■□□□□ 0.02
LdlrP35951 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.17■□□□□ 0.02
LdlrP35951 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LdlrP35951 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms