Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Slc6a11P31650 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.5□□□□□ -0.09
Slc6a11P31650 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Slc6a11P31650 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.5□□□□□ -0.09
Slc6a11P31650 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.5□□□□□ -0.09
Slc6a11P31650 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.5□□□□□ -0.09
Slc6a11P31650 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc6a11P31650 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Efs-202ENSMUST00000227037 2540 ntBASIC14.49□□□□□ -0.09
Slc6a11P31650 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Gm1401-201ENSMUST00000122048 772 ntBASIC14.49□□□□□ -0.09
Slc6a11P31650 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.49□□□□□ -0.09
Slc6a11P31650 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.49□□□□□ -0.09
Slc6a11P31650 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.49□□□□□ -0.09
Slc6a11P31650 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Slc6a11P31650 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.48□□□□□ -0.09
Slc6a11P31650 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.48□□□□□ -0.09
Slc6a11P31650 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.48□□□□□ -0.09
Slc6a11P31650 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.48□□□□□ -0.09
Slc6a11P31650 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
Slc6a11P31650 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.48□□□□□ -0.09
Slc6a11P31650 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Slc6a11P31650 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Slc6a11P31650 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.47□□□□□ -0.09
Slc6a11P31650 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Slc6a11P31650 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Slc6a11P31650 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.47□□□□□ -0.09
Slc6a11P31650 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms