Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nedd8P29595 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.18□□□□□ -0.14
Nedd8P29595 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.18□□□□□ -0.14
Nedd8P29595 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.18□□□□□ -0.14
Nedd8P29595 Gm27405-201ENSMUST00000184201 112 ntBASIC14.18□□□□□ -0.14
Nedd8P29595 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nedd8P29595 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Nedd8P29595 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.18□□□□□ -0.14
Nedd8P29595 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.18□□□□□ -0.14
Nedd8P29595 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nedd8P29595 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Nedd8P29595 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nedd8P29595 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.17□□□□□ -0.14
Nedd8P29595 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nedd8P29595 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nedd8P29595 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.17□□□□□ -0.14
Nedd8P29595 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.17□□□□□ -0.14
Nedd8P29595 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nedd8P29595 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nedd8P29595 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.17□□□□□ -0.14
Nedd8P29595 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.17□□□□□ -0.14
Nedd8P29595 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.17□□□□□ -0.14
Nedd8P29595 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nedd8P29595 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nedd8P29595 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nedd8P29595 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.16□□□□□ -0.14
Nedd8P29595 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nedd8P29595 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nedd8P29595 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nedd8P29595 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.16□□□□□ -0.14
Nedd8P29595 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.16□□□□□ -0.14
Nedd8P29595 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.16□□□□□ -0.14
Nedd8P29595 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nedd8P29595 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nedd8P29595 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nedd8P29595 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nedd8P29595 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nedd8P29595 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.15□□□□□ -0.14
Nedd8P29595 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nedd8P29595 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nedd8P29595 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms