Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.5■□□□□ 0.39
Vcam1P29533 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.5■□□□□ 0.39
Vcam1P29533 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.5■□□□□ 0.39
Vcam1P29533 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vcam1P29533 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.5■□□□□ 0.39
Vcam1P29533 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Vcam1P29533 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.49■□□□□ 0.39
Vcam1P29533 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.49■□□□□ 0.39
Vcam1P29533 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vcam1P29533 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vcam1P29533 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.49■□□□□ 0.39
Vcam1P29533 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.49■□□□□ 0.39
Vcam1P29533 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.49■□□□□ 0.39
Vcam1P29533 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.49■□□□□ 0.39
Vcam1P29533 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vcam1P29533 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Vcam1P29533 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.48■□□□□ 0.39
Vcam1P29533 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vcam1P29533 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.48■□□□□ 0.39
Vcam1P29533 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Vcam1P29533 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.48■□□□□ 0.39
Vcam1P29533 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Vcam1P29533 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Vcam1P29533 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Vcam1P29533 Gm27622-201ENSMUST00000183779 60 ntBASIC17.48■□□□□ 0.39
Vcam1P29533 Gm27920-201ENSMUST00000183953 96 ntBASIC17.48■□□□□ 0.39
Vcam1P29533 Gm27430-201ENSMUST00000184585 107 ntBASIC17.48■□□□□ 0.39
Vcam1P29533 Gm44333-201ENSMUST00000197168 107 ntBASIC17.48■□□□□ 0.39
Vcam1P29533 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.48■□□□□ 0.39
Vcam1P29533 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Vcam1P29533 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.48■□□□□ 0.39
Vcam1P29533 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vcam1P29533 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcam1P29533 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.47■□□□□ 0.39
Vcam1P29533 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.47■□□□□ 0.39
Vcam1P29533 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Vcam1P29533 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.47■□□□□ 0.39
Vcam1P29533 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Gm13015-201ENSMUST00000118674 204 ntBASIC17.47■□□□□ 0.39
Vcam1P29533 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Vcam1P29533 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vcam1P29533 Gm29541-201ENSMUST00000191351 678 ntBASIC17.47■□□□□ 0.39
Vcam1P29533 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.47■□□□□ 0.39
Vcam1P29533 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms