Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1bP25119 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Gm18206-201ENSMUST00000207027 926 ntBASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1bP25119 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Gm10499-201ENSMUST00000174094 934 ntBASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf1bP25119 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Gm6443-201ENSMUST00000203599 874 ntBASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Gm5364-201ENSMUST00000216789 889 ntBASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf1bP25119 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms