Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pde6bP23440 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pde6bP23440 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pde6bP23440 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.67■□□□□ 0.26
Pde6bP23440 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Gm27494-201ENSMUST00000184735 189 ntBASIC16.67■□□□□ 0.26
Pde6bP23440 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.67■□□□□ 0.26
Pde6bP23440 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pde6bP23440 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pde6bP23440 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Auts2-212ENSMUST00000178555 309 ntBASIC16.66■□□□□ 0.26
Pde6bP23440 Gm27301-201ENSMUST00000184012 127 ntBASIC16.66■□□□□ 0.26
Pde6bP23440 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.66■□□□□ 0.26
Pde6bP23440 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pde6bP23440 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pde6bP23440 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.66■□□□□ 0.26
Pde6bP23440 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.66■□□□□ 0.26
Pde6bP23440 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pde6bP23440 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pde6bP23440 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Pde6bP23440 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pde6bP23440 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.65■□□□□ 0.26
Pde6bP23440 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pde6bP23440 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pde6bP23440 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.65■□□□□ 0.26
Pde6bP23440 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.65■□□□□ 0.26
Pde6bP23440 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Pde6bP23440 Gm8396-201ENSMUST00000057361 823 ntBASIC16.65■□□□□ 0.26
Pde6bP23440 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pde6bP23440 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.65■□□□□ 0.26
Pde6bP23440 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.65■□□□□ 0.26
Pde6bP23440 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6bP23440 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Pde6bP23440 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Pde6bP23440 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.64■□□□□ 0.25
Pde6bP23440 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.64■□□□□ 0.25
Pde6bP23440 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.64■□□□□ 0.25
Pde6bP23440 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms