Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.41□□□□□ -0.1
TP20293 Gm4535-201ENSMUST00000182274 558 ntBASIC14.41□□□□□ -0.1
TP20293 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.41□□□□□ -0.1
TP20293 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Gm10355-201ENSMUST00000097146 517 ntBASIC14.41□□□□□ -0.1
TP20293 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TP20293 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TP20293 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TP20293 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TP20293 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TP20293 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TP20293 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.4□□□□□ -0.1
TP20293 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TP20293 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.4□□□□□ -0.1
TP20293 Gm8344-201ENSMUST00000119813 856 ntBASIC14.4□□□□□ -0.1
TP20293 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.4□□□□□ -0.1
TP20293 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.4□□□□□ -0.1
TP20293 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TP20293 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TP20293 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.4□□□□□ -0.1
TP20293 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TP20293 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TP20293 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.39□□□□□ -0.11
TP20293 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.39□□□□□ -0.11
TP20293 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
TP20293 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.39□□□□□ -0.11
TP20293 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.39□□□□□ -0.11
TP20293 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
TP20293 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.39□□□□□ -0.11
TP20293 Gm19164-201ENSMUST00000210667 640 ntBASIC14.39□□□□□ -0.11
TP20293 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.39□□□□□ -0.11
TP20293 Gm6296-201ENSMUST00000222599 943 ntBASIC14.39□□□□□ -0.11
TP20293 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TP20293 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.39□□□□□ -0.11
TP20293 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TP20293 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms