Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Carlr-201ENSMUST00000181515 2574 ntBASIC10.55□□□□□ -0.72
Smim1P0C8K7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smim1P0C8K7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC10.54□□□□□ -0.72
Smim1P0C8K7 Gm44450-201ENSMUST00000199528 114 ntBASIC10.54□□□□□ -0.72
Smim1P0C8K7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smim1P0C8K7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.53□□□□□ -0.72
Smim1P0C8K7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gm43034-201ENSMUST00000198678 1364 ntBASIC10.53□□□□□ -0.72
Smim1P0C8K7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.53□□□□□ -0.72
Smim1P0C8K7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.53□□□□□ -0.72
Smim1P0C8K7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gm7367-201ENSMUST00000057611 492 ntBASIC10.53□□□□□ -0.72
Smim1P0C8K7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.53□□□□□ -0.72
Smim1P0C8K7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smim1P0C8K7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms