Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Polr2aP08775 Gm9797-201ENSMUST00000052902 613 ntBASIC17.2■□□□□ 0.34
Polr2aP08775 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Polr2aP08775 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Polr2aP08775 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Polr2aP08775 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.2■□□□□ 0.34
Polr2aP08775 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Polr2aP08775 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.19■□□□□ 0.34
Polr2aP08775 Gm15678-201ENSMUST00000117573 960 ntBASIC17.19■□□□□ 0.34
Polr2aP08775 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.19■□□□□ 0.34
Polr2aP08775 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Mir1938-201ENSMUST00000158746 100 ntBASIC17.19■□□□□ 0.34
Polr2aP08775 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.19■□□□□ 0.34
Polr2aP08775 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.19■□□□□ 0.34
Polr2aP08775 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.19■□□□□ 0.34
Polr2aP08775 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Polr2aP08775 Mir1894-201ENSMUST00000122802 81 ntBASIC17.19■□□□□ 0.34
Polr2aP08775 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
Polr2aP08775 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.19■□□□□ 0.34
Polr2aP08775 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Polr2aP08775 Gm28760-201ENSMUST00000185995 736 ntBASIC17.19■□□□□ 0.34
Polr2aP08775 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.19■□□□□ 0.34
Polr2aP08775 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Polr2aP08775 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Polr2aP08775 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.18■□□□□ 0.34
Polr2aP08775 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.18■□□□□ 0.34
Polr2aP08775 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.18■□□□□ 0.34
Polr2aP08775 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Polr2aP08775 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Polr2aP08775 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.17■□□□□ 0.34
Polr2aP08775 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.17■□□□□ 0.34
Polr2aP08775 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.17■□□□□ 0.34
Polr2aP08775 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.17■□□□□ 0.34
Polr2aP08775 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.17■□□□□ 0.34
Polr2aP08775 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Polr2aP08775 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.17■□□□□ 0.34
Polr2aP08775 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.17■□□□□ 0.34
Polr2aP08775 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2aP08775 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
Polr2aP08775 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Polr2aP08775 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.16■□□□□ 0.34
Polr2aP08775 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.16■□□□□ 0.34
Polr2aP08775 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.16■□□□□ 0.34
Polr2aP08775 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.16■□□□□ 0.34
Polr2aP08775 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.16■□□□□ 0.34
Polr2aP08775 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.16■□□□□ 0.34
Polr2aP08775 Gm15823-201ENSMUST00000064305 670 ntBASIC17.16■□□□□ 0.34
Polr2aP08775 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms