Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
P06344 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
P06344 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.61□□□□□ -0.23
P06344 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.61□□□□□ -0.23
P06344 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
P06344 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.61□□□□□ -0.23
P06344 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.61□□□□□ -0.23
P06344 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
P06344 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
P06344 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
P06344 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
P06344 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.6□□□□□ -0.23
P06344 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.6□□□□□ -0.23
P06344 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.6□□□□□ -0.23
P06344 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 BC037039-201ENSMUST00000192003 2205 ntBASIC13.6□□□□□ -0.23
P06344 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
P06344 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.6□□□□□ -0.23
P06344 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
P06344 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.59□□□□□ -0.23
P06344 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
P06344 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Gm14494-201ENSMUST00000118786 435 ntBASIC13.59□□□□□ -0.23
P06344 Gm11594-201ENSMUST00000122313 162 ntBASIC13.59□□□□□ -0.23
P06344 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.59□□□□□ -0.23
P06344 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.59□□□□□ -0.23
P06344 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
P06344 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
P06344 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.59□□□□□ -0.23
P06344 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
P06344 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.59□□□□□ -0.23
P06344 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.59□□□□□ -0.23
P06344 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.59□□□□□ -0.23
P06344 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
P06344 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms