Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Apaf1O88879 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Apaf1O88879 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.83■□□□□ 0.77
Apaf1O88879 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.83■□□□□ 0.77
Apaf1O88879 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.83■□□□□ 0.77
Apaf1O88879 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Apaf1O88879 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.83■□□□□ 0.77
Apaf1O88879 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Apaf1O88879 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Apaf1O88879 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Apaf1O88879 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Apaf1O88879 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Apaf1O88879 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Apaf1O88879 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Gm12008-201ENSMUST00000117791 755 ntBASIC19.82■□□□□ 0.76
Apaf1O88879 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.82■□□□□ 0.76
Apaf1O88879 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.82■□□□□ 0.76
Apaf1O88879 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Apaf1O88879 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Apaf1O88879 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Apaf1O88879 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Apaf1O88879 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Apaf1O88879 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.81■□□□□ 0.76
Apaf1O88879 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Apaf1O88879 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.81■□□□□ 0.76
Apaf1O88879 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Apaf1O88879 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Apaf1O88879 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Apaf1O88879 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Apaf1O88879 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Apaf1O88879 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Apaf1O88879 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Apaf1O88879 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.8■□□□□ 0.76
Apaf1O88879 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.8■□□□□ 0.76
Apaf1O88879 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Gm9385-201ENSMUST00000117563 472 ntBASIC19.8■□□□□ 0.76
Apaf1O88879 Gm16198-201ENSMUST00000118766 670 ntBASIC19.8■□□□□ 0.76
Apaf1O88879 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.8■□□□□ 0.76
Apaf1O88879 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.8■□□□□ 0.76
Apaf1O88879 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Apaf1O88879 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Apaf1O88879 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.8■□□□□ 0.76
Apaf1O88879 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.8■□□□□ 0.76
Apaf1O88879 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Apaf1O88879 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.79■□□□□ 0.76
Apaf1O88879 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Apaf1O88879 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.79■□□□□ 0.76
Apaf1O88879 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms