Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.64□□□□□ -0.07
Best1O88870 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.63□□□□□ -0.07
Best1O88870 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Best1O88870 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.63□□□□□ -0.07
Best1O88870 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.63□□□□□ -0.07
Best1O88870 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.63□□□□□ -0.07
Best1O88870 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Gm8396-201ENSMUST00000057361 823 ntBASIC14.63□□□□□ -0.07
Best1O88870 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.63□□□□□ -0.07
Best1O88870 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Best1O88870 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Best1O88870 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.63□□□□□ -0.07
Best1O88870 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.62□□□□□ -0.07
Best1O88870 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.62□□□□□ -0.07
Best1O88870 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Best1O88870 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Best1O88870 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Best1O88870 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Best1O88870 Gm13365-201ENSMUST00000121188 973 ntBASIC14.62□□□□□ -0.07
Best1O88870 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Best1O88870 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.62□□□□□ -0.07
Best1O88870 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Gm18057-201ENSMUST00000208220 503 ntBASIC14.62□□□□□ -0.07
Best1O88870 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.62□□□□□ -0.07
Best1O88870 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.62□□□□□ -0.07
Best1O88870 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Best1O88870 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Best1O88870 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
Best1O88870 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.62□□□□□ -0.07
Best1O88870 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Best1O88870 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Best1O88870 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.61□□□□□ -0.07
Best1O88870 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.61□□□□□ -0.07
Best1O88870 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Gm11745-201ENSMUST00000121669 448 ntBASIC14.61□□□□□ -0.07
Best1O88870 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.61□□□□□ -0.07
Best1O88870 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.61□□□□□ -0.07
Best1O88870 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.61□□□□□ -0.07
Best1O88870 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Best1O88870 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms