Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tgfbr3O88393 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tgfbr3O88393 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tgfbr3O88393 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tgfbr3O88393 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tgfbr3O88393 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.49□□□□□ -0.09
Tgfbr3O88393 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.49□□□□□ -0.09
Tgfbr3O88393 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Tgfbr3O88393 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Mir6977-201ENSMUST00000184960 64 ntBASIC14.48□□□□□ -0.09
Tgfbr3O88393 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.48□□□□□ -0.09
Tgfbr3O88393 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Tgfbr3O88393 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.47□□□□□ -0.09
Tgfbr3O88393 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tgfbr3O88393 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Gm13223-201ENSMUST00000118609 747 ntBASIC14.46□□□□□ -0.09
Tgfbr3O88393 Gm2810-201ENSMUST00000118681 990 ntBASIC14.46□□□□□ -0.09
Tgfbr3O88393 Gm15693-201ENSMUST00000120470 637 ntBASIC14.46□□□□□ -0.09
Tgfbr3O88393 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Gm27618-201ENSMUST00000183671 60 ntBASIC14.46□□□□□ -0.09
Tgfbr3O88393 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tgfbr3O88393 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tgfbr3O88393 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms