Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vti1bO88384 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Vti1bO88384 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Vti1bO88384 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Vti1bO88384 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vti1bO88384 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.6□□□□□ -0.07
Vti1bO88384 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Vti1bO88384 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Vti1bO88384 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vti1bO88384 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Gm15372-201ENSMUST00000120729 834 ntBASIC14.59□□□□□ -0.07
Vti1bO88384 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.59□□□□□ -0.07
Vti1bO88384 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Vti1bO88384 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vti1bO88384 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Vti1bO88384 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.58□□□□□ -0.07
Vti1bO88384 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vti1bO88384 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vti1bO88384 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vti1bO88384 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vti1bO88384 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vti1bO88384 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Vti1bO88384 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.58□□□□□ -0.08
Vti1bO88384 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.58□□□□□ -0.08
Vti1bO88384 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.58□□□□□ -0.08
Vti1bO88384 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Vti1bO88384 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vti1bO88384 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.57□□□□□ -0.08
Vti1bO88384 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vti1bO88384 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.57□□□□□ -0.08
Vti1bO88384 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.57□□□□□ -0.08
Vti1bO88384 Gm9103-201ENSMUST00000119371 405 ntBASIC14.57□□□□□ -0.08
Vti1bO88384 Gm12895-201ENSMUST00000122214 226 ntBASIC14.57□□□□□ -0.08
Vti1bO88384 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.57□□□□□ -0.08
Vti1bO88384 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.57□□□□□ -0.08
Vti1bO88384 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.57□□□□□ -0.08
Vti1bO88384 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.57□□□□□ -0.08
Vti1bO88384 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.57□□□□□ -0.08
Vti1bO88384 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms