Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Gm4913-201ENSMUST00000117075 1290 ntBASIC18■□□□□ 0.47
Slc4a4O88343 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Gm17271-201ENSMUST00000165535 355 ntBASIC18■□□□□ 0.47
Slc4a4O88343 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Slc4a4O88343 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18■□□□□ 0.47
Slc4a4O88343 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc4a4O88343 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18■□□□□ 0.47
Slc4a4O88343 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc4a4O88343 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.99■□□□□ 0.47
Slc4a4O88343 Gm14822-201ENSMUST00000122247 291 ntBASIC17.99■□□□□ 0.47
Slc4a4O88343 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Slc4a4O88343 Gm27702-201ENSMUST00000184512 56 ntBASIC17.99■□□□□ 0.47
Slc4a4O88343 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.99■□□□□ 0.47
Slc4a4O88343 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Slc4a4O88343 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.99■□□□□ 0.47
Slc4a4O88343 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc4a4O88343 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Slc4a4O88343 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Slc4a4O88343 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc4a4O88343 Gm24513-201ENSMUST00000174964 138 ntBASIC17.98■□□□□ 0.47
Slc4a4O88343 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Slc4a4O88343 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Slc4a4O88343 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Gm27397-201ENSMUST00000184997 107 ntBASIC17.98■□□□□ 0.47
Slc4a4O88343 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc4a4O88343 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc4a4O88343 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Slc4a4O88343 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Slc4a4O88343 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc4a4O88343 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc4a4O88343 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc4a4O88343 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.97■□□□□ 0.47
Slc4a4O88343 Thap2-203ENSMUST00000218989 527 ntBASIC17.97■□□□□ 0.47
Slc4a4O88343 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.97■□□□□ 0.47
Slc4a4O88343 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.97■□□□□ 0.47
Slc4a4O88343 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.97■□□□□ 0.47
Slc4a4O88343 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Slc4a4O88343 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Slc4a4O88343 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
Slc4a4O88343 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc4a4O88343 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc4a4O88343 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Slc4a4O88343 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.96■□□□□ 0.47
Slc4a4O88343 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.96■□□□□ 0.47
Slc4a4O88343 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms