Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.95□□□□□ -0.18
Alx3O70137 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Alx3O70137 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Alx3O70137 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Alx3O70137 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Gm13836-201ENSMUST00000121159 501 ntBASIC13.94□□□□□ -0.18
Alx3O70137 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.94□□□□□ -0.18
Alx3O70137 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.94□□□□□ -0.18
Alx3O70137 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.94□□□□□ -0.18
Alx3O70137 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.94□□□□□ -0.18
Alx3O70137 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Alx3O70137 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Alx3O70137 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.93□□□□□ -0.18
Alx3O70137 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Alx3O70137 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.93□□□□□ -0.18
Alx3O70137 Gm14722-201ENSMUST00000118943 689 ntBASIC13.93□□□□□ -0.18
Alx3O70137 Gm15372-201ENSMUST00000120729 834 ntBASIC13.93□□□□□ -0.18
Alx3O70137 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.93□□□□□ -0.18
Alx3O70137 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.93□□□□□ -0.18
Alx3O70137 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.93□□□□□ -0.18
Alx3O70137 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Alx3O70137 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Alx3O70137 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Alx3O70137 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Alx3O70137 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Alx3O70137 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Alx3O70137 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Alx3O70137 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.92□□□□□ -0.18
Alx3O70137 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm8825-201ENSMUST00000182565 998 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm4518-201ENSMUST00000182638 718 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.92□□□□□ -0.18
Alx3O70137 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms