Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SncaO55042 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SncaO55042 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.67□□□□□ -0.38
SncaO55042 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SncaO55042 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
SncaO55042 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SncaO55042 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.66□□□□□ -0.38
SncaO55042 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Gm25406-201ENSMUST00000157599 105 ntBASIC12.66□□□□□ -0.38
SncaO55042 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Gm6345-202ENSMUST00000180900 204 ntBASIC12.66□□□□□ -0.38
SncaO55042 Gm10231-201ENSMUST00000181584 441 ntBASIC12.66□□□□□ -0.38
SncaO55042 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Gm17808-201ENSMUST00000200859 894 ntBASIC12.66□□□□□ -0.38
SncaO55042 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.66□□□□□ -0.38
SncaO55042 Gm10175-202ENSMUST00000208752 441 ntBASIC12.66□□□□□ -0.38
SncaO55042 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SncaO55042 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SncaO55042 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SncaO55042 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SncaO55042 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.65□□□□□ -0.38
SncaO55042 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Gm13312-201ENSMUST00000119631 718 ntBASIC12.65□□□□□ -0.38
SncaO55042 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SncaO55042 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
SncaO55042 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.65□□□□□ -0.38
SncaO55042 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.65□□□□□ -0.38
SncaO55042 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.65□□□□□ -0.38
SncaO55042 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Gm7367-201ENSMUST00000057611 492 ntBASIC12.65□□□□□ -0.38
SncaO55042 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms