Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smarce1O54941 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.19■□□□□ 0.5
Smarce1O54941 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smarce1O54941 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Smarce1O54941 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.18■□□□□ 0.5
Smarce1O54941 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smarce1O54941 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smarce1O54941 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Gm4459-201ENSMUST00000118750 468 ntBASIC18.17■□□□□ 0.5
Smarce1O54941 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smarce1O54941 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.17■□□□□ 0.5
Smarce1O54941 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.17■□□□□ 0.5
Smarce1O54941 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.17■□□□□ 0.5
Smarce1O54941 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smarce1O54941 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smarce1O54941 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smarce1O54941 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.16■□□□□ 0.5
Smarce1O54941 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Smarce1O54941 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.16■□□□□ 0.5
Smarce1O54941 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smarce1O54941 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smarce1O54941 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.16■□□□□ 0.5
Smarce1O54941 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smarce1O54941 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smarce1O54941 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smarce1O54941 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smarce1O54941 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smarce1O54941 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.15■□□□□ 0.5
Smarce1O54941 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.15■□□□□ 0.5
Smarce1O54941 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smarce1O54941 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.15■□□□□ 0.5
Smarce1O54941 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.15■□□□□ 0.5
Smarce1O54941 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smarce1O54941 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smarce1O54941 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms