Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.95□□□□□ -0.5
Tnfsf11O35235 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Gm2274-201ENSMUST00000184539 609 ntBASIC11.94□□□□□ -0.5
Tnfsf11O35235 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Gm5417-201ENSMUST00000079706 384 ntBASIC11.94□□□□□ -0.5
Tnfsf11O35235 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.94□□□□□ -0.5
Tnfsf11O35235 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfsf11O35235 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.93□□□□□ -0.5
Tnfsf11O35235 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfsf11O35235 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms