Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hdac1O09106 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.2■□□□□ 0.5
Hdac1O09106 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.2■□□□□ 0.5
Hdac1O09106 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hdac1O09106 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.2■□□□□ 0.5
Hdac1O09106 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.2■□□□□ 0.5
Hdac1O09106 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.2■□□□□ 0.5
Hdac1O09106 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hdac1O09106 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hdac1O09106 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.19■□□□□ 0.5
Hdac1O09106 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hdac1O09106 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Gm23547-201ENSMUST00000158210 271 ntBASIC18.19■□□□□ 0.5
Hdac1O09106 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Hdac1O09106 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Hdac1O09106 Gm6659-201ENSMUST00000174752 547 ntBASIC18.19■□□□□ 0.5
Hdac1O09106 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.19■□□□□ 0.5
Hdac1O09106 Carlr-201ENSMUST00000181515 2574 ntBASIC18.19■□□□□ 0.5
Hdac1O09106 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hdac1O09106 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hdac1O09106 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Gm15358-201ENSMUST00000119249 520 ntBASIC18.18■□□□□ 0.5
Hdac1O09106 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.18■□□□□ 0.5
Hdac1O09106 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Gm7506-201ENSMUST00000207758 815 ntBASIC18.18■□□□□ 0.5
Hdac1O09106 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.18■□□□□ 0.5
Hdac1O09106 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Hdac1O09106 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hdac1O09106 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.18■□□□□ 0.5
Hdac1O09106 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hdac1O09106 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac1O09106 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.17■□□□□ 0.5
Hdac1O09106 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Hdac1O09106 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.17■□□□□ 0.5
Hdac1O09106 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.17■□□□□ 0.5
Hdac1O09106 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.17■□□□□ 0.5
Hdac1O09106 AA414768-201ENSMUST00000121924 1257 ntBASIC18.17■□□□□ 0.5
Hdac1O09106 Gm27867-201ENSMUST00000184778 125 ntBASIC18.17■□□□□ 0.5
Hdac1O09106 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hdac1O09106 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Hdac1O09106 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.17■□□□□ 0.5
Hdac1O09106 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac1O09106 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms