Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Mir5126-201ENSMUST00000175513 77 ntBASIC15.64■□□□□ 0.09
Ercc2O08811 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.64■□□□□ 0.09
Ercc2O08811 Gm2651-201ENSMUST00000203560 838 ntBASIC15.64■□□□□ 0.09
Ercc2O08811 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.64■□□□□ 0.09
Ercc2O08811 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ercc2O08811 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ercc2O08811 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ercc2O08811 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Ercc2O08811 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.63■□□□□ 0.09
Ercc2O08811 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ercc2O08811 Gm12350-201ENSMUST00000121208 462 ntBASIC15.63■□□□□ 0.09
Ercc2O08811 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ercc2O08811 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ercc2O08811 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.63■□□□□ 0.09
Ercc2O08811 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ercc2O08811 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ercc2O08811 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ercc2O08811 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.62■□□□□ 0.09
Ercc2O08811 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.62■□□□□ 0.09
Ercc2O08811 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ercc2O08811 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.62■□□□□ 0.09
Ercc2O08811 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.62■□□□□ 0.09
Ercc2O08811 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.62■□□□□ 0.09
Ercc2O08811 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ercc2O08811 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.62■□□□□ 0.09
Ercc2O08811 Gm4899-201ENSMUST00000178708 719 ntBASIC15.62■□□□□ 0.09
Ercc2O08811 Gm7787-201ENSMUST00000216858 688 ntBASIC15.62■□□□□ 0.09
Ercc2O08811 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.62■□□□□ 0.09
Ercc2O08811 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ercc2O08811 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.62■□□□□ 0.09
Ercc2O08811 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ercc2O08811 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.61■□□□□ 0.09
Ercc2O08811 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ercc2O08811 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.61■□□□□ 0.09
Ercc2O08811 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ercc2O08811 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Gm27628-201ENSMUST00000184911 107 ntBASIC15.61■□□□□ 0.09
Ercc2O08811 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.61■□□□□ 0.09
Ercc2O08811 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.61■□□□□ 0.09
Ercc2O08811 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ercc2O08811 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
Ercc2O08811 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.61■□□□□ 0.09
Ercc2O08811 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.61■□□□□ 0.09
Ercc2O08811 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Ercc2O08811 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ercc2O08811 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms