Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Gm8410-201ENSMUST00000117225 605 ntBASIC18.34■□□□□ 0.53
NpcdF8VQB8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.34■□□□□ 0.53
NpcdF8VQB8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.34■□□□□ 0.53
NpcdF8VQB8 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.34■□□□□ 0.53
NpcdF8VQB8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NpcdF8VQB8 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.33■□□□□ 0.53
NpcdF8VQB8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
NpcdF8VQB8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NpcdF8VQB8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NpcdF8VQB8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NpcdF8VQB8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NpcdF8VQB8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NpcdF8VQB8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.33■□□□□ 0.52
NpcdF8VQB8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Gm11543-201ENSMUST00000120758 370 ntBASIC18.33■□□□□ 0.52
NpcdF8VQB8 Gm14767-201ENSMUST00000121559 586 ntBASIC18.33■□□□□ 0.52
NpcdF8VQB8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Gm27838-201ENSMUST00000184829 128 ntBASIC18.33■□□□□ 0.52
NpcdF8VQB8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Gm9063-201ENSMUST00000223299 582 ntBASIC18.33■□□□□ 0.52
NpcdF8VQB8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NpcdF8VQB8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NpcdF8VQB8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.32■□□□□ 0.52
NpcdF8VQB8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Gm38225-201ENSMUST00000194001 393 ntBASIC18.32■□□□□ 0.52
NpcdF8VQB8 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.32■□□□□ 0.52
NpcdF8VQB8 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.32■□□□□ 0.52
NpcdF8VQB8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NpcdF8VQB8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Gm15487-201ENSMUST00000122373 465 ntBASIC18.31■□□□□ 0.52
NpcdF8VQB8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.31■□□□□ 0.52
NpcdF8VQB8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.31■□□□□ 0.52
NpcdF8VQB8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NpcdF8VQB8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NpcdF8VQB8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms