Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb9E9Q5G2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb9E9Q5G2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Gm27301-201ENSMUST00000184012 127 ntBASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb9E9Q5G2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Gm9385-201ENSMUST00000117563 472 ntBASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb9E9Q5G2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Gm17271-201ENSMUST00000165535 355 ntBASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms