Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC8.42□□□□□ -1.06
Herc1E9PZP8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC8.42□□□□□ -1.06
Herc1E9PZP8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Gm5850-201ENSMUST00000192923 1206 ntBASIC8.42□□□□□ -1.06
Herc1E9PZP8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Mir3060-201ENSMUST00000175339 83 ntBASIC8.42□□□□□ -1.06
Herc1E9PZP8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC8.42□□□□□ -1.06
Herc1E9PZP8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm45219-201ENSMUST00000205602 465 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 AC122876.1-201ENSMUST00000217619 825 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm14017-201ENSMUST00000121934 386 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm10109-202ENSMUST00000206890 1211 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm14452-201ENSMUST00000118680 1632 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm27331-201ENSMUST00000183705 60 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Snora73a-201ENSMUST00000082453 205 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC8.41□□□□□ -1.06
Herc1E9PZP8 AC099645.1-201ENSMUST00000226476 1105 ntBASIC8.41□□□□□ -1.06
Herc1E9PZP8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc1E9PZP8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Herc1E9PZP8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC8.4□□□□□ -1.06
Herc1E9PZP8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Gm5953-201ENSMUST00000220644 2616 ntBASIC8.4□□□□□ -1.06
Herc1E9PZP8 Gm11667-201ENSMUST00000119828 486 ntBASIC8.4□□□□□ -1.06
Herc1E9PZP8 Gm12208-201ENSMUST00000122004 163 ntBASIC8.4□□□□□ -1.06
Herc1E9PZP8 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC8.4□□□□□ -1.06
Herc1E9PZP8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc1E9PZP8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Herc1E9PZP8 Gm6222-201ENSMUST00000120787 396 ntBASIC8.4□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms