Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Rps4l-202ENSMUST00000204242 789 ntBASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 CT010506.4-201ENSMUST00000225457 351 ntBASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Gm45293-201ENSMUST00000209754 1812 ntBASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hmcn1D3YXG0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Gm9826-201ENSMUST00000029124 1299 ntBASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Gm9333-201ENSMUST00000205452 1323 ntBASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hmcn1D3YXG0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm38341-201ENSMUST00000195357 515 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm43758-201ENSMUST00000199500 367 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 AC165157.4-201ENSMUST00000220587 139 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm37519-201ENSMUST00000191687 2210 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm8318-201ENSMUST00000182954 872 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm7446-201ENSMUST00000221035 1240 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm16476-201ENSMUST00000221544 139 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm8227-201ENSMUST00000223306 571 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 AC154846.1-201ENSMUST00000226278 862 ntBASIC4.33□□□□□ -1.72
Hmcn1D3YXG0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms