Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm21854-201ENSMUST00000179901 471 ntBASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Gm18187-201ENSMUST00000196476 984 ntBASIC15.53■□□□□ 0.08
Col4a6B1AVK5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Gm6180-201ENSMUST00000065243 498 ntBASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col4a6B1AVK5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Gm45098-201ENSMUST00000207179 657 ntBASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col4a6B1AVK5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.52■□□□□ 0.07
Col4a6B1AVK5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.51■□□□□ 0.07
Col4a6B1AVK5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Col4a6B1AVK5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col4a6B1AVK5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col4a6B1AVK5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms