Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Shroom2A2ALU4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Shroom2A2ALU4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC23.77■■□□□ 1.39
Shroom2A2ALU4 Gm15808-201ENSMUST00000119046 604 ntBASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Gm37811-201ENSMUST00000192416 2601 ntBASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Gm44832-201ENSMUST00000208849 2303 ntBASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Shroom2A2ALU4 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Gm5370-201ENSMUST00000187187 574 ntBASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Gm43822-201ENSMUST00000200285 476 ntBASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Shroom2A2ALU4 Gm6756-201ENSMUST00000180647 1620 ntBASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Gm7783-201ENSMUST00000204795 781 ntBASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Gm45453-201ENSMUST00000211758 853 ntBASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Gm7446-201ENSMUST00000221035 1240 ntBASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Shroom2A2ALU4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Zscan30-202ENSMUST00000224144 1458 ntBASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Gm3695-201ENSMUST00000087222 1009 ntBASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Shroom2A2ALU4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Shroom2A2ALU4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shroom2A2ALU4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Gm26083-201ENSMUST00000157904 193 ntBASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC23.7■■□□□ 1.38
Shroom2A2ALU4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Shroom2A2ALU4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom2A2ALU4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC23.69■■□□□ 1.38
Shroom2A2ALU4 AC149588.3-201ENSMUST00000227515 150 ntBASIC23.69■■□□□ 1.38
Shroom2A2ALU4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom2A2ALU4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shroom2A2ALU4 Gm6091-201ENSMUST00000098307 165 ntBASIC23.69■■□□□ 1.38
Shroom2A2ALU4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms