Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Gm4459-201ENSMUST00000118750 468 ntBASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Gm18622-201ENSMUST00000219361 595 ntBASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ccdc194A0A140LIT1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Gm14859-201ENSMUST00000117752 357 ntBASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc194A0A140LIT1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc194A0A140LIT1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc194A0A140LIT1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
Ccdc194A0A140LIT1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc194A0A140LIT1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc194A0A140LIT1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc194A0A140LIT1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc194A0A140LIT1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc194A0A140LIT1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc194A0A140LIT1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms