Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm12527-201ENSMUST00000117967 564 ntBASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv3A0A0A6YYE2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv3A0A0A6YYE2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv3A0A0A6YYE2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv3A0A0A6YYE2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv3A0A0A6YYE2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv3A0A0A6YYE2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.77□□□□□ -0.52
Trbv3A0A0A6YYE2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm26039-201ENSMUST00000158152 144 ntBASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms