Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-4A0A075B6B4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Trav6-4A0A075B6B4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-4A0A075B6B4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-4A0A075B6B4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-4A0A075B6B4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-4A0A075B6B4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-4A0A075B6B4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Gm37153-201ENSMUST00000193637 231 ntBASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Mzt1-203ENSMUST00000227948 952 ntBASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-4A0A075B6B4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 AV026068-213ENSMUST00000223675 1171 ntBASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Gm7461-201ENSMUST00000058918 827 ntBASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-4A0A075B6B4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-4A0A075B6B4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms