Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.33■□□□□ 0.04
H2afb2S4R1M3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
H2afb2S4R1M3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gm17971-201ENSMUST00000190239 806 ntBASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gm6089-201ENSMUST00000197666 938 ntBASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gm6376-201ENSMUST00000209407 580 ntBASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.31■□□□□ 0.04
H2afb2S4R1M3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb2S4R1M3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Gm25990-201ENSMUST00000102440 86 ntBASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
H2afb2S4R1M3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms