Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H2afb3S4R1G7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H2afb3S4R1G7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 BC037039-201ENSMUST00000192003 2205 ntBASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb3S4R1G7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Olfr129-201ENSMUST00000122318 993 ntBASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb3S4R1G7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms