Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm25925-201ENSMUST00000158314 306 ntBASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarcb1Q9Z0H3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gm14701-201ENSMUST00000117156 348 ntBASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gm9385-201ENSMUST00000117563 472 ntBASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gm15920-201ENSMUST00000118998 402 ntBASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcb1Q9Z0H3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Gm20553-201ENSMUST00000204205 844 ntBASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcb1Q9Z0H3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms