Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40aQ9R1C7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40aQ9R1C7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40aQ9R1C7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40aQ9R1C7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40aQ9R1C7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40aQ9R1C7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Gm27741-201ENSMUST00000185060 237 ntBASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Gm6296-201ENSMUST00000222599 943 ntBASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf40aQ9R1C7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Prpf40aQ9R1C7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Gm11780-201ENSMUST00000136880 516 ntBASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf40aQ9R1C7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Prpf40aQ9R1C7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Gm13418-201ENSMUST00000119097 944 ntBASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Prpf40aQ9R1C7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms